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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799308.1_cds_XP_016464558.1_5713
CDS Infomation

[gene=LOC107787487] [db_xref=GeneID:107787487] [protein=polypyrimidine tract-binding protein homolog 1-like] [protein_id=XP_016464558.1] [location=complement(join(30703..31128,31316..31428,32487..32568,32694..32798,32870..32927,34632..34727,34898..34971,35066..35128,35814..36023,36588..36770))] [gbkey=CDS]
Sequence

ATGTCAACATCCGGGCAACAGCAGTTTCGGTACACACAGACGCCGTCGAAAGTTCTTCAC
CTCCGGAATTTGCCATGGGATTGCAGCGATGAAGAGCTTGTAGAGCTTTGCAAGCCCTTT
GGTAAAATTGTCAACACCAAGTGCAACGTCGGGGCCAACCGCAACCAAGCCTTTGTCGAA
TTCGCAGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCCTCGTCTTCAGAGCCT
GCTCAAGTTCGTGGCAAGACTGTATACATCCAGTATTCTAACAGGAATGAGATTGTCAAT
AATAAGAGTCCCGGAGATGTTCCAGGAAATGTTTTGCTGGTAACTATTGAGGGTGTTGAA
GCTGGTGATGTCAGCATCGATGTGATTCATTTGGTGTTTTCAGCCTTTGGTTTTGTGCAA
AAGATTGCTACTTTTGAAAAGGCAGCAGGTTTTCAGGCATTGATTCAATTTAGTGATGTT
GGGACAGCATCTGCTGCTAGAGAGGCACTGGATGGGAGAAGTATACCAAAGTACCTGCTT
CCGGAACATGTTAATCATTGTCACTTGCGCATCTCATACTCTGCACACACGGACCTTAAT
ATCAAATTTCAATCTCATCGGAGCAGGGACTATACAAACCCTTATCTCCCAGTAAATCCT
ACTGCAATGGAGGGGCTTCTTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCC
GAGAGTAATGTGCTTTTTGCCTCTCTAGAAAATATGCAGTATGCTGTTACTATTGATGTC
CTTCACACGGTATTCTCTGCATTTGGCACTGTCCAAAAGATTGCTATATTTGAGAAGAAT
GGTCAAACCCAGGCATTAATTCAGTATCCTGATGTAACAACTGCAGCTGCTGCAAAGGAC
GCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCT
CGTCATACTGATCTGAATGTACAGGCATACAGTGACAAAAGTAGAGATTACACAGTTCCA
GAATCAAGTTTGCTTGCAATGCAACAAGCATCAGCGGTCCATGCCACACCTCCAGTTTGG
CATAACCCTCAGTCTGGTCCACAGTCATTTGGCTATGCTGCTGCCGCTGCTGTTCCTGGC
CAAGCATCTACATCCCAAATGTCCTCATGGAATCCAAATTTGCAGGGTGGCGGATCAACC
TTTCCATCTACTCCTACCAGATTTCCTGGGCAATCATATGCTTCACCGGTTTCTGCTTAT
GCAACAGCAGTAAATCCTCCTGGATCGTCACAGCAGACCAATCACATTGTTAGTAGTGGT
CGATCTTATAGTGTAAGTCAGCCTCCTCATCCATCAACCATGCCGCCTGGAGGTGTTCCA
CCTCCTGGTCATGCACCTTATCACGGTTAA

Peptide Sequence

PEP ID

XP_016464558.1
PEP Infomation

PREDICTED: polypyrimidine tract-binding protein homolog 1-like [Nicotiana tabacum]
Sequence

MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHATPPVW
HNPQSGPQSFGYAAAAAVPGQASTSQMSSWNPNLQGGGSTFPSTPTRFPGQSYASPVSAY
ATAVNPPGSSQQTNHIVSSGRSYSVSQPPHPSTMPPGGVPPPGHAPYHG

Transcript Sequence

Gene sequence data has not been registered.